From 76f807f6dda48b6d606309cea79005e612e4f665 Mon Sep 17 00:00:00 2001
From: hackbard <hackbard>
Date: Wed, 29 Nov 2006 19:10:55 +0000
Subject: [PATCH] more foo

---
 moldyn.c | 5 +++--
 moldyn.h | 2 +-
 run      | 9 +++------
 sic.c    | 1 -
 4 files changed, 7 insertions(+), 10 deletions(-)

diff --git a/moldyn.c b/moldyn.c
index eb2c606..9d782d6 100644
--- a/moldyn.c
+++ b/moldyn.c
@@ -41,9 +41,9 @@ int moldyn_init(t_moldyn *moldyn,int argc,char **argv) {
 
 int moldyn_shutdown(t_moldyn *moldyn) {
 
+	printf("[moldyn] shutdown\n");
 	moldyn_log_shutdown(moldyn);
 	link_cell_shutdown(moldyn);
-	moldyn_log_shutdown(moldyn);
 	rand_close(&(moldyn->random));
 	free(moldyn->atom);
 
@@ -171,9 +171,10 @@ int moldyn_set_log(t_moldyn *moldyn,u8 type,char *fb,int timer) {
 
 int moldyn_log_shutdown(t_moldyn *moldyn) {
 
+	printf("[moldyn] log shutdown\n");
 	if(moldyn->efd) close(moldyn->efd);
 	if(moldyn->mfd) close(moldyn->mfd);
-	if(moldyn->visual) visual_tini(moldyn->visual);
+	if(&(moldyn->vis)) visual_tini(&(moldyn->vis));
 
 	return 0;
 }
diff --git a/moldyn.h b/moldyn.h
index 947467c..a2855a7 100644
--- a/moldyn.h
+++ b/moldyn.h
@@ -109,7 +109,7 @@ typedef struct s_moldyn {
 	int mfd;		/* fd for momentum log */
 	unsigned int vwrite;	/* how often to visualize atom information */
 	char vfb[64];		/* visualization file name base */
-	void *visual;		/* pointer (hack!) */
+	//void *visual;		/* pointer (hack!) */
 	unsigned int swrite;	/* how often to create a save file */
 	char sfb[64];		/* visualization file name base */
 
diff --git a/run b/run
index b1a2ceb..264a4ac 100755
--- a/run
+++ b/run
@@ -1,13 +1,10 @@
 mkdir -p saves video
 ./clean
-./sic $@
+./sic
 if [ "$?" == "0" ]; then
 	./perms
-	argv="`echo $@ | grep -- '-V'`"
-	if [ "$argv" ] ; then
-		base=`echo $argv | awk -F'-V' '{ print $2 }' | \
-			awk '{ print $2 }'`
-		rasmol -nodisplay < ${base}.scr > /dev/null 2>&1
+	if [ "$1" ] ; then
+		rasmol -nodisplay < $1.scr > /dev/null 2>&1
 		./ppm2avi
 	fi
 fi
diff --git a/sic.c b/sic.c
index 5d85534..b5a8d93 100644
--- a/sic.c
+++ b/sic.c
@@ -69,7 +69,6 @@ int main(int argc,char **argv) {
 	/* set (initial) dimensions of simulation volume */
 	printf("[sic] setting dimensions\n");
 	set_dim(&md,10*LC_SI,10*LC_SI,10*LC_SI,TRUE);
-	printf("%.15f <---\n",md.vis.dim.x);
 
 	/* set periodic boundary conditions in all directions */
 	printf("[sic] setting periodic boundary conditions\n");
-- 
2.20.1